postgresql/doc/src/sgml/gist.sgml

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$PostgreSQL: pgsql/doc/src/sgml/gist.sgml,v 1.24 2005/11/04 23:14:00 petere Exp $
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<chapter id="GiST">
<title>GiST Indexes</title>
<sect1 id="gist-intro">
<title>Introduction</title>
<para>
<indexterm>
<primary>index</primary>
<secondary>GiST</secondary>
</indexterm>
<indexterm>
<primary>GiST</primary>
<see>index</see>
</indexterm>
<acronym>GiST</acronym> stands for Generalized Search Tree. It is a
balanced, tree-structured access method, that acts as a base template in
which to implement arbitrary indexing schemes. B+-trees, R-trees and many
other indexing schemes can be implemented in <acronym>GiST</acronym>.
</para>
<para>
One advantage of <acronym>GiST</acronym> is that it allows the development
of custom data types with the appropriate access methods, by
an expert in the domain of the data type, rather than a database expert.
</para>
<para>
Some of the information here is derived from the University of California at
Berkeley's GiST Indexing Project
<ulink url="http://gist.cs.berkeley.edu/">web site</ulink> and
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<ulink url="http://www.sai.msu.su/~megera/postgres/gist/papers/concurrency/access-methods-for-next-generation.pdf.gz">
Marcel Kornacker's thesis, Access Methods for Next-Generation Database Systems</ulink>.
The <acronym>GiST</acronym>
implementation in <productname>PostgreSQL</productname> is primarily
maintained by Teodor Sigaev and Oleg Bartunov, and there is more
information on their
<ulink url="http://www.sai.msu.su/~megera/postgres/gist/">website</ulink>.
</para>
</sect1>
<sect1 id="gist-extensibility">
<title>Extensibility</title>
<para>
Traditionally, implementing a new index access method meant a lot of
difficult work. It was necessary to understand the inner workings of the
database, such as the lock manager and Write-Ahead Log. The
<acronym>GiST</acronym> interface has a high level of abstraction,
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requiring the access method implementer to only implement the semantics of
the data type being accessed. The <acronym>GiST</acronym> layer itself
takes care of concurrency, logging and searching the tree structure.
</para>
<para>
This extensibility should not be confused with the extensibility of the
other standard search trees in terms of the data they can handle. For
example, <productname>PostgreSQL</productname> supports extensible B+-trees
and R-trees. That means that you can use
<productname>PostgreSQL</productname> to build a B+-tree or R-tree over any
data type you want. But B+-trees only support range predicates
(<literal>&lt;</literal>, <literal>=</literal>, <literal>&gt;</literal>),
and R-trees only support n-D range queries (contains, contained, equals).
</para>
<para>
So if you index, say, an image collection with a
<productname>PostgreSQL</productname> B+-tree, you can only issue queries
such as <quote>is imagex equal to imagey</quote>, <quote>is imagex less
than imagey</quote> and <quote>is imagex greater than imagey</quote>?
Depending on how you define <quote>equals</quote>, <quote>less than</quote>
and <quote>greater than</quote> in this context, this could be useful.
However, by using a <acronym>GiST</acronym> based index, you could create
ways to ask domain-specific questions, perhaps <quote>find all images of
horses</quote> or <quote>find all over-exposed images</quote>.
</para>
<para>
All it takes to get a <acronym>GiST</acronym> access method up and running
is to implement seven user-defined methods, which define the behavior of
keys in the tree. Of course these methods have to be pretty fancy to
support fancy queries, but for all the standard queries (B+-trees,
R-trees, etc.) they're relatively straightforward. In short,
<acronym>GiST</acronym> combines extensibility along with generality, code
reuse, and a clean interface.
</para>
</sect1>
<sect1 id="gist-implementation">
<title>Implementation</title>
<para>
There are seven methods that an index operator class for
<acronym>GiST</acronym> must provide:
</para>
<variablelist>
<varlistentry>
<term>consistent</term>
<listitem>
<para>
Given a predicate <literal>p</literal> on a tree page, and a user
query, <literal>q</literal>, this method will return false if it is
certain that both <literal>p</literal> and <literal>q</literal> cannot
be true for a given data item.
</para>
</listitem>
</varlistentry>
<varlistentry>
<term>union</term>
<listitem>
<para>
This method consolidates information in the tree. Given a set of
entries, this function generates a new predicate that is true for all
the entries.
</para>
</listitem>
</varlistentry>
<varlistentry>
<term>compress</term>
<listitem>
<para>
Converts the data item into a format suitable for physical storage in
an index page.
</para>
</listitem>
</varlistentry>
<varlistentry>
<term>decompress</term>
<listitem>
<para>
The reverse of the <function>compress</function> method. Converts the
index representation of the data item into a format that can be
manipulated by the database.
</para>
</listitem>
</varlistentry>
<varlistentry>
<term>penalty</term>
<listitem>
<para>
Returns a value indicating the <quote>cost</quote> of inserting the new
entry into a particular branch of the tree. items will be inserted
down the path of least <function>penalty</function> in the tree.
</para>
</listitem>
</varlistentry>
<varlistentry>
<term>picksplit</term>
<listitem>
<para>
When a page split is necessary, this function decides which entries on
the page are to stay on the old page, and which are to move to the new
page.
</para>
</listitem>
</varlistentry>
<varlistentry>
<term>same</term>
<listitem>
<para>
Returns true if two entries are identical, false otherwise.
</para>
</listitem>
</varlistentry>
</variablelist>
</sect1>
<sect1 id="gist-examples">
<title>Examples</title>
<para>
The <productname>PostgreSQL</productname> source distribution includes
several examples of index methods implemented using
<acronym>GiST</acronym>. The core system currently provides R-Tree
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equivalent functionality for some of the built-in geometric data types
(see <filename>src/backend/access/gist/gistproc.c</>). The following
<filename>contrib</> modules also contain <acronym>GiST</acronym>
operator classes:
</para>
<variablelist>
<varlistentry>
<term>btree_gist</term>
<listitem>
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<para>B-Tree equivalent functionality for several data types</para>
</listitem>
</varlistentry>
<varlistentry>
<term>cube</term>
<listitem>
<para>Indexing for multi-dimensional cubes</para>
</listitem>
</varlistentry>
<varlistentry>
<term>intarray</term>
<listitem>
<para>RD-Tree for one-dimensional array of int4 values</para>
</listitem>
</varlistentry>
<varlistentry>
<term>ltree</term>
<listitem>
<para>Indexing for tree-like structures</para>
</listitem>
</varlistentry>
<varlistentry>
<term>pg_trgm</term>
<listitem>
<para>Text similarity using trigram matching</para>
</listitem>
</varlistentry>
<varlistentry>
<term>seg</term>
<listitem>
<para>Indexing for <quote>float ranges</quote></para>
</listitem>
</varlistentry>
<varlistentry>
<term>tsearch2</term>
<listitem>
<para>Full text indexing</para>
</listitem>
</varlistentry>
</variablelist>
</sect1>
<sect1 id="gist-recovery">
<title>Crash Recovery</title>
<para>
Usually, replay of the WAL log is sufficient to restore the integrity
of a GiST index following a database crash. However, there are some
corner cases in which the index state is not fully rebuilt. The index
will still be functionally correct, but there may be some performance
degradation. When this occurs, the index can be repaired by
<command>VACUUM</>ing its table, or by rebuilding the index using
<command>REINDEX</>. In some cases a plain <command>VACUUM</> is
not sufficient, and either <command>VACUUM FULL</> or <command>REINDEX</>
is needed. The need for one of these procedures is indicated by occurrence
of this log message during crash recovery:
<programlisting>
LOG: index NNN/NNN/NNN needs VACUUM or REINDEX to finish crash recovery
</programlisting>
or this log message during routine index insertions:
<programlisting>
LOG: index "FOO" needs VACUUM or REINDEX to finish crash recovery
</programlisting>
If a plain <command>VACUUM</> finds itself unable to complete recovery
fully, it will return a notice:
<programlisting>
NOTICE: index "FOO" needs VACUUM FULL or REINDEX to finish crash recovery
</programlisting>
</para>
</sect1>
</chapter>